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BMCBI
2010
156views more  BMCBI 2010»
15 years 6 months ago
Protein complex prediction via verifying and reconstructing the topology of domain-domain interactions
Background: High-throughput methods for detecting protein-protein interactions enable us to obtain large interaction networks, and also allow us to computationally identify the as...
Yosuke Ozawa, Rintaro Saito, Shigeo Fujimori, Hisa...
BMCBI
2010
104views more  BMCBI 2010»
15 years 6 months ago
Analysis of protein-protein docking decoys using interaction fingerprints: application to the reconstruction of CaM-ligand compl
Background: Protein-protein docking for proteins with large conformational changes was analyzed by using interaction fingerprints, one of the scales for measuring similarities amo...
Nobuyuki Uchikoga, Takatsugu Hirokawa
ICMCS
2006
IEEE
119views Multimedia» more  ICMCS 2006»
16 years 20 days ago
Adaptive Multimedia Flow Regulation and Delay Analysis for End-Hosts in P2P Networks
This paper proposes a novel adaptive algorithm based on a new soft-regulator (σ, ρ, λ) for concurrent multimedia flows at end hosts. Our algorithm has the following features: ...
Weijia Jia
GECCO
2009
Springer
148views Optimization» more  GECCO 2009»
16 years 1 months ago
An evolutionary approach to constructive induction for link discovery
This paper presents a genetic programming-based symbolic regression approach to the construction of relational features in link analysis applications. Specifically, we consider t...
Tim Weninger, William H. Hsu, Jing Xia, Waleed Alj...
BMCBI
2008
138views more  BMCBI 2008»
15 years 6 months ago
SynechoNET: integrated protein-protein interaction database of a model cyanobacterium Synechocystis sp. PCC 6803
Background: Cyanobacteria are model organisms for studying photosynthesis, carbon and nitrogen assimilation, evolution of plant plastids, and adaptability to environmental stresse...
Woo-Yeon Kim, Sungsoo Kang, Byoung-Chul Kim, Jeehy...