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BMCBI
2010
118views more  BMCBI 2010»
15 years 6 months ago
Walk-weighted subsequence kernels for protein-protein interaction extraction
Background: The construction of interaction networks between proteins is central to understanding the underlying biological processes. However, since many useful relations are exc...
Seonho Kim, Juntae Yoon, Jihoon Yang, Seog Park
BMCBI
2008
150views more  BMCBI 2008»
15 years 6 months ago
BibGlimpse: The case for a light-weight reprint manager in distributed literature research
Background: While text-mining and distributed annotation systems both aim at capturing knowledge and presenting it in a standardized form, there have been few attempts to investig...
Thomas Tüchler, Golda Velez, Alexandra Graf, ...
BMCBI
2007
83views more  BMCBI 2007»
15 years 6 months ago
Identification of sequence motifs significantly associated with antisense activity
Background: Predicting the suppression activity of antisense oligonucleotide sequences is the main goal of the rational design of nucleic acids. To create an effective predictive ...
Kyle A. McQuisten, Andrew S. Peek
BMCBI
2006
143views more  BMCBI 2006»
15 years 6 months ago
IsoSVM - Distinguishing isoforms and paralogs on the protein level
Background: Recent progress in cDNA and EST sequencing is yielding a deluge of sequence data. Like database search results and proteome databases, this data gives rise to inferred...
Michael Spitzer, Stefan Lorkowski, Paul Cullen, Al...
NN
2008
Springer
15 years 6 months ago
Multilayer in-place learning networks for modeling functional layers in the laminar cortex
Currently, there is a lack of general-purpose in-place learning networks that model feature layers in the cortex. By "general-purpose" we mean a general yet adaptive hig...
Juyang Weng, Tianyu Luwang, Hong Lu, Xiangyang Xue