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RECOMB
2007
Springer
16 years 6 months ago
Production-Passage-Time Approximation: A New Approximation Method to Accelerate the Simulation Process of Enzymatic Reactions
Abstract. Given the substantial computational requirements of stochastic simulation, approximation is essential for efficient analysis of any realistic biochemical system. This pap...
Hiroyuki Kuwahara, Chris J. Myers
AIPS
2010
15 years 8 months ago
Classical Planning in MDP Heuristics: with a Little Help from Generalization
Heuristic functions make MDP solvers practical by reducing their time and memory requirements. Some of the most effective heuristics (e.g., the FF heuristic function) first determ...
Andrey Kolobov, Mausam, Daniel S. Weld
BMCBI
2006
116views more  BMCBI 2006»
15 years 6 months ago
MICA: desktop software for comprehensive searching of DNA databases
Background: Molecular biologists work with DNA databases that often include entire genomes. A common requirement is to search a DNA database to find exact matches for a nondegener...
William A. Stokes, Benjamin S. Glick
ISAAC
2005
Springer
153views Algorithms» more  ISAAC 2005»
15 years 12 months ago
Network Game with Attacker and Protector Entities
Consider an information network with harmful procedures called attackers (e.g., viruses); each attacker uses a probability distribution to choose a node of the network to damage. O...
Marios Mavronicolas, Vicky G. Papadopoulou, Anna P...
INFOCOM
2002
IEEE
15 years 11 months ago
Optimal Configuration of OSPF Aggregates
—Open Shortest Path First (OSPF) is a popular protocol for routing within an autonomous system (AS) domain. In order to scale for large networks containing hundreds and thousands...
Rajeev Rastogi, Yuri Breitbart, Minos N. Garofalak...