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RECOMB
2002
Springer
16 years 7 months ago
Provably sensitive Indexing strategies for biosequence similarity search
The field of algorithms for pairwisc biosequence similarity search is dominated by heuristic methods of high efficiency but uncertain sensitivity. One reason that more formal stri...
Jeremy Buhler
CVPR
2010
IEEE
16 years 3 months ago
Learning Full Pairwise Affinities for Spectral Segmentation
This paper studies the problem of learning a full range of pairwise affinities gained by integrating local grouping cues for spectral segmentation. The overall quality of the spect...
Tae Hoon Kim (Seoul National University), Kyoung M...
IPPS
2007
IEEE
16 years 1 months ago
Reconfigurable Architecture for Biological Sequence Comparison in Reduced Memory Space
DNA sequence alignment is a very important problem in bioinformatics. The algorithm proposed by Smith-Waterman (SW) is an exact method that obtains optimal local alignments in qua...
Azzedine Boukerche, Jan Mendonca Correa, Alba Cris...
APCSAC
2005
IEEE
16 years 13 days ago
Irregular Redistribution Scheduling by Partitioning Messages
Abstract. Dynamic data redistribution enhances data locality and improves algorithm performance for numerous scientific problems on distributed memory multi-computers systems. Prev...
Chang Yu, Ching-Hsien Hsu, Kun-Ming Yu, Chiu-Kuo L...
DCC
2000
IEEE
15 years 11 months ago
Trees, Windows, and Tiles for Wavelet Image Compression
We investigate the task of compressing an image by using different probability models for compressing different regions of the image. In an earlier paper, we introduced a class of...
Wee Sun Lee