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BMCBI
2002
137views more  BMCBI 2002»
15 years 6 months ago
ORFer - retrieval of protein sequences and open reading frames from GenBank and storage into relational databases or text files
Background: Functional genomics involves the parallel experimentation with large sets of proteins. This requires management of large sets of open reading frames as a prerequisite ...
Konrad Büssow, Steve Hoffmann, Volker Sievert
POPL
2012
ACM
14 years 2 months ago
Playing in the grey area of proofs
Interpolation is an important technique in verification and static analysis of programs. In particular, interpolants extracted from proofs of various properties are used in invar...
Krystof Hoder, Laura Kovács, Andrei Voronko...
ICPP
2008
IEEE
16 years 1 months ago
Parallelization and Characterization of Probabilistic Latent Semantic Analysis
Probabilistic Latent Semantic Analysis (PLSA) is one of the most popular statistical techniques for the analysis of two-model and co-occurrence data. It has applications in inform...
Chuntao Hong, Wenguang Chen, Weimin Zheng, Jiulong...
EUROPAR
2004
Springer
15 years 12 months ago
Detecting Data Races in Sequential Programs with DIOTA
In this paper we show that data races, a type of bug that generally only causes havoc in parallel programs, can also occur in sequential programs that use signal handlers. Fortunat...
Michiel Ronsse, Jonas Maebe, Koenraad De Bosschere
CIDR
2011
230views Algorithms» more  CIDR 2011»
14 years 10 months ago
Consistency Analysis in Bloom: a CALM and Collected Approach
Distributed programming has become a topic of widespread interest, and many programmers now wrestle with tradeoffs between data consistency, availability and latency. Distributed...
Peter Alvaro, Neil Conway, Joe Hellerstein, Willia...