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BMCBI
2011
14 years 10 months ago
Structator: fast index-based search for RNA sequence-structure patterns
Background: The secondary structure of RNA molecules is intimately related to their function and often more conserved than the sequence. Hence, the important task of searching dat...
Fernando Meyer, Stefan Kurtz, Rolf Backofen, Sebas...
CC
2011
Springer
270views System Software» more  CC 2011»
14 years 10 months ago
Subregion Analysis and Bounds Check Elimination for High Level Arrays
For decades, the design and implementation of arrays in programming languages has reflected a natural tension between productivity and performance. Recently introduced HPCS langua...
Mackale Joyner, Zoran Budimlic, Vivek Sarkar
ISNN
2011
Springer
14 years 9 months ago
Orthogonal Feature Learning for Time Series Clustering
This paper presents a new method that uses orthogonalized features for time series clustering and classification. To cluster or classify time series data, either original data or...
Xiaozhe Wang, Leo Lopes
SDM
2011
SIAM
269views Data Mining» more  SDM 2011»
14 years 9 months ago
Semi-Supervised Convolution Graph Kernels for Relation Extraction
Extracting semantic relations between entities is an important step towards automatic text understanding. In this paper, we propose a novel Semi-supervised Convolution Graph Kerne...
Xia Ning, Yanjun Qi
SDM
2011
SIAM
370views Data Mining» more  SDM 2011»
14 years 9 months ago
Sparse Latent Semantic Analysis
Latent semantic analysis (LSA), as one of the most popular unsupervised dimension reduction tools, has a wide range of applications in text mining and information retrieval. The k...
Xi Chen, Yanjun Qi, Bing Bai, Qihang Lin, Jaime G....