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» Evaluation of clustering algorithms for gene expression data
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BIOCOMP
2008
15 years 8 months ago
Prediction of Protein Function Using Graph Container and Message Passing
We introduce a novel parameter called container flux, which is used to measure the information sharing capacity between two distinct nodes in a graph. Other useful information, bot...
Hongbo Zhou, Qiang Shawn Cheng, Mehdi Zargham
BMCBI
2006
166views more  BMCBI 2006»
15 years 6 months ago
SEQOPTICS: a protein sequence clustering system
Background: Protein sequence clustering has been widely used as a part of the analysis of protein structure and function. In most cases single linkage or graph-based clustering al...
Yonghui Chen, Kevin D. Reilly, Alan P. Sprague, Zh...
KDD
2002
ACM
182views Data Mining» more  KDD 2002»
16 years 6 months ago
On the need for time series data mining benchmarks: a survey and empirical demonstration
In the last decade there has been an explosion of interest in mining time series data. Literally hundreds of papers have introduced new algorithms to index, classify, cluster and s...
Eamonn J. Keogh, Shruti Kasetty
ISCAPDCS
2004
15 years 7 months ago
A VFSA Scheduler for Radiative Transfer Data in Climate Models
Scheduling and load-balancing techniques play an integral role in reducing the overall execution time of scientific applications on clustered multi-node systems. The increasing co...
S. P. Muszala, Gita Alaghband, Daniel A. Connors, ...
ICDCS
2011
IEEE
14 years 6 months ago
Provisioning a Multi-tiered Data Staging Area for Extreme-Scale Machines
—Massively parallel scientific applications, running on extreme-scale supercomputers, produce hundreds of terabytes of data per run, driving the need for storage solutions to im...
Ramya Prabhakar, Sudharshan S. Vazhkudai, Youngjae...