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» Evaluation of clustering algorithms for gene expression data
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BMCBI
2007
174views more  BMCBI 2007»
15 years 6 months ago
ESTuber db: an online database for Tuber borchii EST sequences
Background: The ESTuber database (http://www.itb.cnr.it/estuber) includes 3,271 Tuber borchii expressed sequence tags (EST). The dataset consists of 2,389 sequences from an in-hou...
Barbara Lazzari, Andrea Caprera, Cristian Cosentin...
BMCBI
2008
126views more  BMCBI 2008»
15 years 6 months ago
FCI: an R-based algorithm for evaluating uncertainty of absolute real-time PCR quantification
Background: FCI is an R code for analyzing data from real-time PCR experiments. This algorithm estimates standard curve features as well as nucleic acid concentrations and confide...
Paolo Verderio, Sara Pizzamiglio, Fabio Gallo, Sim...
KDD
2004
ACM
118views Data Mining» more  KDD 2004»
16 years 7 months ago
Parallel computation of high dimensional robust correlation and covariance matrices
The computation of covariance and correlation matrices are critical to many data mining applications and processes. Unfortunately the classical covariance and correlation matrices...
James Chilson, Raymond T. Ng, Alan Wagner, Ruben H...
BIBM
2008
IEEE
125views Bioinformatics» more  BIBM 2008»
15 years 6 months ago
Systems Biology via Redescription and Ontologies (III): Protein Classification Using Malaria Parasite's Temporal Transcriptomic
This paper addresses the protein classification problem, and explores how its accuracy can be improved by using information from time-course gene expression data. The methods are ...
Antonina Mitrofanova, Samantha Kleinberg, Jane Car...
KDD
2002
ACM
155views Data Mining» more  KDD 2002»
16 years 7 months ago
SyMP: an efficient clustering approach to identify clusters of arbitrary shapes in large data sets
We propose a new clustering algorithm, called SyMP, which is based on synchronization of pulse-coupled oscillators. SyMP represents each data point by an Integrate-and-Fire oscill...
Hichem Frigui