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» Evaluation of clustering algorithms for gene expression data
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ICAI
2007
15 years 8 months ago
Mining and Dynamic Simulation of Sub-Networks from Large Biomolecular Networks
Biomolecular networks dynamically respond to stimuli and implement cellular function. Understanding these dynamic changes is the key challenge for cell biologists. As biomolecular...
Xiaohua Hu, Fang-Xiang Wu, Michael K. Ng, Bahrad A...
ICASSP
2011
IEEE
14 years 10 months ago
Uncover cooperative gene regulations by microRNAs and transcription factors in glioblastoma using a nonnegative hybrid factor mo
—Transcriptional regulation by transcription factors (TFs) and microRNAs controls when and how much RNA is created. Due to technical limitations, the protein level expressions of...
Jia Meng, Hung-I Harry Chen, Jianqiu Zhang, Yidong...
IPPS
2006
IEEE
16 years 19 days ago
Lossless compression for large scale cluster logs
The growing computational and storage needs of several scientific applications mandate the deployment of extreme-scale parallel machines, such as IBM’s Blue Gene/L which can acc...
R. Balakrishnan, Ramendra K. Sahoo
BIOINFORMATICS
2006
89views more  BIOINFORMATICS 2006»
15 years 6 months ago
Maximum significance clustering of oligonucleotide microarrays
Affymetrix high-density oligonucleotide microarrays measure expression of DNA transcripts using probesets, i.e. multiple probes per transcript. Usually, these multiple measurement...
Dick de Ridder, Frank J. T. Staal, Jacques J. M. v...
IJIS
2008
123views more  IJIS 2008»
15 years 6 months ago
Algorithms of nonlinear document clustering based on fuzzy multiset model
Abstract: Fuzzy multiset is applicable as a model of information retrieval because it has the mathematical structure which expresses the number and the degree of attribution of an ...
Kiyotaka Mizutani, Ryo Inokuchi, Sadaaki Miyamoto