One of the main goals in the analysis of microarray data is to identify groups of genes and groups of experimental conditions (including environments, individuals, and tissues) tha...
Background: Most existing algorithms for the inference of the structure of gene regulatory networks from gene expression data assume that the activity levels of transcription fact...
In this paper, we explore modeling overlapping biological processes. We discuss a probabilistic model of overlapping biological processes, gene membership in those processes, and ...
The freedom and transparency of information flow on the Internet has heightened concerns of privacy. Given a set of data items, clustering algorithms group similar items together...
: Array-based analysis of chromatin immunoprecipitation data (ChIP-chip) is a powerful technique for identifying DNA target regions of individual transcription factors. Here, we pr...
Michael Seifert, Jens Keilwagen, Marc Strickert, I...