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» Evaluation of clustering algorithms for gene expression data
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BMCBI
2010
135views more  BMCBI 2010»
15 years 6 months ago
Efficient genome-scale phylogenetic analysis under the duplication-loss and deep coalescence cost models
Background: Genomic data provide a wealth of new information for phylogenetic analysis. Yet making use of this data requires phylogenetic methods that can efficiently analyze extr...
Mukul S. Bansal, J. Gordon Burleigh, Oliver Eulens...
PKDD
2004
Springer
138views Data Mining» more  PKDD 2004»
16 years 10 min ago
Combining Multiple Clustering Systems
Three methods for combining multiple clustering systems are presented and evaluated, focusing on the problem of finding the correspondence between clusters of different systems. ...
Constantinos Boulis, Mari Ostendorf
CIDM
2009
IEEE
15 years 11 months ago
An architecture and algorithms for multi-run clustering
—This paper addresses two main challenges for clustering which require extensive human effort: selecting appropriate parameters for an arbitrary clustering algorithm and identify...
Rachsuda Jiamthapthaksin, Christoph F. Eick, Vadee...
BMCBI
2007
148views more  BMCBI 2007»
15 years 6 months ago
WeederH: an algorithm for finding conserved regulatory motifs and regions in homologous sequences
Background: This work addresses the problem of detecting conserved transcription factor binding sites and in general regulatory regions through the analysis of sequences from homo...
Giulio Pavesi, Federico Zambelli, Graziano Pesole
RECOMB
2004
Springer
16 years 7 months ago
The Statistical Significance of Max-Gap Clusters
Identifying gene clusters, genomic regions that share local similarities in gene organization, is a prerequisite for many different types of genomic analyses, including operon pred...
Rose Hoberman, David Sankoff, Dannie Durand