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» Evaluation of clustering algorithms for gene expression data
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RSFDGRC
2005
Springer
192views Data Mining» more  RSFDGRC 2005»
16 years 4 days ago
An Open Source Microarray Data Analysis System with GUI: Quintet
We address Quintet, an R-based unified cDNA microarray data analysis system with GUI. Five principal categories of microarray data analysis have been coherently integrated in Quin...
Jun-kyoung Choe, Tae-Hoon Chung, Sunyong Park, Hwa...
PSIVT
2009
Springer
139views Multimedia» more  PSIVT 2009»
15 years 11 months ago
Recovery Rate of Clustering Algorithms
This article provides a simple and general way for defining the recovery rate of clustering algorithms using a given family of old clusters for evaluating the performance of the a...
Fajie Li, Reinhard Klette
BMCBI
2004
156views more  BMCBI 2004»
15 years 6 months ago
GeneXplorer: an interactive web application for microarray data visualization and analysis
Background: When publishing large-scale microarray datasets, it is of great value to create supplemental websites where either the full data, or selected subsets corresponding to ...
Christian A. Rees, Janos Demeter, John C. Matese, ...
BMCBI
2008
107views more  BMCBI 2008»
15 years 6 months ago
A mixture model approach to sample size estimation in two-sample comparative microarray experiments
Background: Choosing the appropriate sample size is an important step in the design of a microarray experiment, and recently methods have been proposed that estimate sample sizes ...
Tommy S. Jørstad, Herman Midelfart, Atle M....
BMCBI
2007
104views more  BMCBI 2007»
15 years 6 months ago
Joint mapping of genes and conditions via multidimensional unfolding analysis
Background: Microarray compendia profile the expression of genes in a number of experimental conditions. Such data compendia are useful not only to group genes and conditions base...
Katrijn Van Deun, Kathleen Marchal, Willem J. Heis...