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BMCBI
2004
96views more  BMCBI 2004»
15 years 6 months ago
GeneOrder3.0: Software for comparing the order of genes in pairs of small bacterial genomes
Background: An increasing number of whole viral and bacterial genomes are being sequenced and deposited in public databases. In parallel to the mounting interest in whole genomes,...
Srikanth Celamkoti, Sashidhara Kundeti, Anjan Purk...
CAGD
2004
76views more  CAGD 2004»
15 years 6 months ago
Topologically consistent trimmed surface approximations based on triangular patches
Topologically consistent algorithms for the intersection and trimming of free-form parametric surfaces are of fundamental importance in computer-aided design, analysis, and manufa...
Rida T. Farouki, Chang Yong Han, Joel Hass, Thomas...
JCB
2000
107views more  JCB 2000»
15 years 6 months ago
A Discriminative Framework for Detecting Remote Protein Homologies
A new method for detecting remote protein homologies is introduced and shown to perform well in classifying protein domains by SCOP superfamily. The method is a variant of support...
Tommi Jaakkola, Mark Diekhans, David Haussler
NAR
2002
85views more  NAR 2002»
15 years 6 months ago
CKAAPs DB: a Conserved Key Amino Acid Positions DataBase
The Conserved Key Amino Acid Positions DataBase (CKAAPs DB) provides access to an analysis of structurally similar proteins with dissimilar sequences where key residues within a c...
Wilfred W. Li, Boojala V. B. Reddy, John G. Tate, ...
NAR
2007
124views more  NAR 2007»
15 years 6 months ago
The RNAz web server: prediction of thermodynamically stable and evolutionarily conserved RNA structures
Many non-coding RNA genes and cis-acting regulatory elements of mRNAs contain RNA secondary structures that are critical for their function. Such functional RNAs can be predicted ...
Andreas R. Gruber, Richard Neuböck, Ivo L. Ho...