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ISSTA
2012
ACM
13 years 9 months ago
Residual investigation: predictive and precise bug detection
We introduce the concept of “residual investigation” for program analysis. A residual investigation is a dynamic check installed as a result of running a static analysis that ...
Kaituo Li, Christoph Reichenbach, Christoph Csalln...
BMCBI
2010
123views more  BMCBI 2010»
15 years 6 months ago
Decoding HMMs using the k best paths: algorithms and applications
Background: Traditional algorithms for hidden Markov model decoding seek to maximize either the probability of a state path or the number of positions of a sequence assigned to th...
Daniel G. Brown 0001, Daniil Golod
BMCBI
2007
134views more  BMCBI 2007»
15 years 6 months ago
PLAN: a web platform for automating high-throughput BLAST searches and for managing and mining results
Background: BLAST searches are widely used for sequence alignment. The search results are commonly adopted for various functional and comparative genomics tasks such as annotating...
Ji He, Xinbin Dai, Xuechun Zhao
BMCBI
2006
158views more  BMCBI 2006»
15 years 6 months ago
Detection of non-coding RNAs on the basis of predicted secondary structure formation free energy change
Background: Non-coding RNAs (ncRNAs) have a multitude of roles in the cell, many of which remain to be discovered. However, it is difficult to detect novel ncRNAs in biochemical s...
Andrew V. Uzilov, Joshua M. Keegan, David H. Mathe...
SAS
1997
Springer
162views Formal Methods» more  SAS 1997»
15 years 10 months ago
Exact Flow Analysis
We present a type-based flow analysis for simply typed lambda calculus with booleans, data-structures and recursion. The analysis is exact in the following sense: if the analysis ...
Christian Mossin