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KDD
2001
ACM
149views Data Mining» more  KDD 2001»
16 years 6 months ago
Maximum entropy methods for biological sequence modeling
Many of the same modeling methods used in natural languages, speci cally Markov models and HMM's, have also been applied to biological sequence analysis. In recent years, nat...
Eugen C. Buehler, Lyle H. Ungar
BMCBI
2007
156views more  BMCBI 2007»
15 years 6 months ago
Accuracy of structure-based sequence alignment of automatic methods
Background: Accurate sequence alignments are essential for homology searches and for building three-dimensional structural models of proteins. Since structure is better conserved ...
Changhoon Kim, Byungkook Lee
BMCBI
2011
14 years 9 months ago
ShoRAH: estimating the genetic diversity of a mixed sample from next-generation sequencing data
Background: With next-generation sequencing technologies, experiments that were considered prohibitive only a few years ago are now possible. However, while these technologies hav...
Osvaldo Zagordi, Arnab Bhattacharya, Nicholas Erik...
CIKM
2009
Springer
16 years 22 days ago
Fast and effective histogram construction
Histogram construction or sequence segmentation is a basic task with applications in database systems, information retrieval, and knowledge management. Its aim is to approximate a...
Felix Halim, Panagiotis Karras, Roland H. C. Yap
PATMOS
2000
Springer
15 years 9 months ago
Early Power Estimation for System-on-Chip Designs
Abstract. Reduction of chip packaging and cooling costs for deep sub-micron SystemOn-Chip (SOC) designs is an emerging issue. We present a simulation-based methodology able to real...
Marcello Lajolo, Luciano Lavagno, Matteo Sonza Reo...