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ACAL
2007
Springer
16 years 1 months ago
An Integrated QAP-Based Approach to Visualize Patterns of Gene Expression Similarity
Abstract. This paper illustrates how the Quadratic Assignment Problem (QAP) is used as a mathematical model that helps to produce a visualization of microarray data, based on the r...
Mario Inostroza-Ponta, Alexandre Mendes, Regina Be...
BMCBI
2008
145views more  BMCBI 2008»
15 years 7 months ago
Directed acyclic graph kernels for structural RNA analysis
Background: Recent discoveries of a large variety of important roles for non-coding RNAs (ncRNAs) have been reported by numerous researchers. In order to analyze ncRNAs by kernel ...
Kengo Sato, Toutai Mituyama, Kiyoshi Asai, Yasubum...
ISMB
1994
15 years 8 months ago
An Improved System for Exon Recognition and Gene Modeling in Human DNA Sequence
A new version of the GRAIL system (Uberbacher and Mural, 1991; Mural et al., 1992; Uberbacher et al., 1993), called GRAILII, has recently been developed (Xu et al., 1994). GRAILII...
Yin Xu, J. Ralph Einstein, Richard J. Mural, Manes...
SPIRE
2005
Springer
16 years 1 months ago
Using the k-Nearest Neighbor Graph for Proximity Searching in Metric Spaces
Proximity searching consists in retrieving from a database, objects that are close to a query. For this type of searching problem, the most general model is the metric space, where...
Rodrigo Paredes, Edgar Chávez
CVPR
2009
IEEE
16 years 5 months ago
Markov Chain Monte Carlo Combined with Deterministic Methods for Markov Random Field Optimization
Many vision problems have been formulated as en- ergy minimization problems and there have been signif- icant advances in energy minimization algorithms. The most widely-used energ...
Wonsik Kim (Seoul National University), Kyoung Mu ...