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» Encodings of the Sequence Constraint
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CSIE
2009
IEEE
16 years 1 months ago
Identifying DNA Strands Using a Kernel of Classified Sequences
— Automated DNA sequencing produces a large amount of raw DNA sequence data that then needs to be classified, organized, and annotation. One major application is the comparison o...
Guillermo Tonsmann, David D. Pollock, Wanjun Gu, T...
BMCBI
2002
137views more  BMCBI 2002»
15 years 6 months ago
ORFer - retrieval of protein sequences and open reading frames from GenBank and storage into relational databases or text files
Background: Functional genomics involves the parallel experimentation with large sets of proteins. This requires management of large sets of open reading frames as a prerequisite ...
Konrad Büssow, Steve Hoffmann, Volker Sievert
BMCBI
2002
131views more  BMCBI 2002»
15 years 6 months ago
Efficient Boolean implementation of universal sequence maps (bUSM)
Background: Recently, Almeida and Vinga offered a new approach for the representation of arbitrary discrete sequences, referred to as Universal Sequence Maps (USM), and discussed ...
John Schwacke, Jonas S. Almeida
CVPR
2006
IEEE
16 years 8 months ago
Surface Geometric Constraints for Stereo in Belief Propagation
Belief propagation has been shown to be a powerful inference mechanism for stereo correspondence. However the classical formulation of belief propagation implicitly imposes the fr...
Gang Li, Steven W. Zucker
ICPR
2008
IEEE
16 years 7 months ago
Object localization using affine invariant substructure constraints
In this paper we propose a novel method for generic object localization. The method is based on modeling the object as a graph at two levels: a local substructural representation ...
Ahmed M. Elgammal, Ishani Chakraborty