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» Efficient protein alignment algorithm for protein search
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BMCBI
2010
123views more  BMCBI 2010»
15 years 6 months ago
Decoding HMMs using the k best paths: algorithms and applications
Background: Traditional algorithms for hidden Markov model decoding seek to maximize either the probability of a state path or the number of positions of a sequence assigned to th...
Daniel G. Brown 0001, Daniil Golod
BMCBI
2007
102views more  BMCBI 2007»
15 years 6 months ago
Setting up a large set of protein-ligand PDB complexes for the development and validation of knowledge-based docking algorithms
Background: The number of algorithms available to predict ligand-protein interactions is large and ever-increasing. The number of test cases used to validate these methods is usua...
Luis A. Diago, Persy Morell, Longendri Aguilera, E...
BMCBI
2011
14 years 9 months ago
Faster Smith-Waterman database searches with inter-sequence SIMD parallelisation
Background: The Smith-Waterman algorithm for local sequence alignment is more sensitive than heuristic methods for database searching, but also more time-consuming. The fastest ap...
Torbjørn Rognes
ICCV
2007
IEEE
16 years 8 months ago
Blurred/Non-Blurred Image Alignment using Sparseness Prior
Aligning a pair of blurred and non-blurred images is a prerequisite for many image and video restoration and graphics applications. The traditional alignment methods such as direct...
Lu Yuan, Jian Sun, Long Quan, Heung-Yeung Shum
ICMCS
2006
IEEE
227views Multimedia» more  ICMCS 2006»
16 years 1 days ago
Adaptive Dual AK-D Tree Search Algorithm for ICP Registration Applications
An algorithm for finding coupling points plays an important role in the Iterative Closest Point algorithm (ICP) which is widely used in registration applications in medical and 3-...
Jiann-Der Lee, Shih-Sen Hsieh, Chung-Hsien Huang, ...