607 search results - page 87 / 122 » Efficient protein alignment algorithm for protein search |
176
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BMCBI
2006
15 years 6 months ago
2006
Background: Quantitative descriptions of amino acid similarity, expressed as probabilistic models of evolutionary interchangeability, are central to many mainstream bioinformatic ...
163
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CCCG
2010
15 years 7 months ago
2010
We present a data structure for efficient axis-aligned orthogonal range search on a set of n lines in a bounded plane. The algorithm requires O(log n + k) time in the worst case t...
155
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BMCBI
2005
15 years 6 months ago
2005
Background: Peptide Mass Fingerprinting (PMF) is a widely used mass spectrometry (MS) method of analysis of proteins and peptides. It relies on the comparison between experimental...
168
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BMCBI
2007
15 years 6 months ago
2007
Background: In proteomic analysis, MS/MS spectra acquired by mass spectrometer are assigned to peptides by database searching algorithms such as SEQUEST. The assignations of pepti...
145
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BMCBI
2010
15 years 6 months ago
2010
Background: The Medium-chain Dehydrogenases/Reductases (MDR) form a protein superfamily whose size and complexity defeats traditional means of subclassification; it currently has ...