607 search results - page 65 / 122 » Efficient protein alignment algorithm for protein search |
167
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BMCBI
2004
15 years 6 months ago
2004
Background: Existing sequence alignment algorithms assume that similarities between DNA or amino acid sequences are linearly ordered. That is, stretches of similar nucleotides or ...
155
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RECOMB
2005
Springer
16 years 6 months ago
2005
Springer
This paper proposes a novel tree decomposition based side-chain assignment algorithm, which can obtain the globally optimal solution of the side-chain packing problem very efficien...
225
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BMCBI
2011
15 years 1 months ago
2011
Background: Atomic Solvation Parameters (ASP) model has been proven to be a very successful method of calculating the binding free energy of protein complexes. This suggests that ...
298
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COMPLIFE
2006
Springer
15 years 10 months ago
2006
Springer
Abstract. Molecular shapes play an important role in molecular interactions, e.g., between a protein and a ligand. The `outer' shape of a molecule can be approximated by its s...
197
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IPPS
2006
IEEE
16 years 9 days ago
2006
IEEE
In this paper we describe a new approach for the well known problem in bioinformatics: Multiple Sequence Alignment (MSA). MSA is fundamental task as it represents an essential pla...