607 search results - page 32 / 122 » Efficient protein alignment algorithm for protein search |
143
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BMCBI
2007
15 years 6 months ago
2007
Background: In the last decade, techniques were established for the large scale genome-wide analysis of proteins, RNA, and metabolites, and database solutions have been developed ...
174
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RECOMB
2007
Springer
16 years 6 months ago
2007
Springer
We describe an algorithm, IsoRank, for global alignment of two protein-protein interaction (PPI) networks. IsoRank aims to maximize the overall match between the two networks; in c...
186
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BMCBI
2005
15 years 5 months ago
2005
Background: The chemical property and biological function of a protein is a direct consequence of its primary structure. Several algorithms have been developed which determine ali...
150
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RECOMB
2008
Springer
16 years 6 months ago
2008
Springer
We developed Gr?mlin 2.0, a new multiple network aligner with (1) a novel scoring function that can use arbitrary features of a multiple network alignment, such as protein deletion...
171
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BMCBI
2006
15 years 6 months ago
2006
Background: Several entropy-based methods have been developed for scoring sequence conservation in protein multiple sequence alignments. High scoring amino acid positions may corr...