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BMCBI
2004
151views more  BMCBI 2004»
15 years 6 months ago
Design, implementation and evaluation of a practical pseudoknot folding algorithm based on thermodynamics
Background: The general problem of RNA secondary structure prediction under the widely used thermodynamic model is known to be NP-complete when the structures considered include a...
Jens Reeder, Robert Giegerich
CN
1998
64views more  CN 1998»
15 years 6 months ago
Decentralized Network Connection Preemption Algorithms
Connection preemption provides available and reliable services to high-priority connections when a network is heavily loaded and connection request arrival patterns are unknown, o...
Mohammad Peyravian, Ajay D. Kshemkalyani
ALGORITHMICA
2006
86views more  ALGORITHMICA 2006»
15 years 7 months ago
Slabpose Columnsort: A New Oblivious Algorithm for Out-of-Core Sorting on Distributed-Memory Clusters
Our goal is to develop a robust out-of-core sorting program for a distributed-memory cluster. The literature contains two dominant paradigms for out-of-core sorting algorithms: me...
Geeta Chaudhry, Thomas H. Cormen
ICNC
2005
Springer
16 years 11 days ago
Adaptive Parallel Ant Colony Algorithm
: Two strategies for information exchange between processors in parallel ant colony algorithm are presented. Theses strategies can make each processor choose other processors to co...
Ling Chen, Chunfang Zhang
BMCBI
2006
144views more  BMCBI 2006»
15 years 6 months ago
Development and implementation of an algorithm for detection of protein complexes in large interaction networks
Background: After complete sequencing of a number of genomes the focus has now turned to proteomics. Advanced proteomics technologies such as two-hybrid assay, mass spectrometry e...
Md. Altaf-Ul-Amin, Yoko Shinbo, Kenji Mihara, Ken ...