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BMCBI
2008
86views more  BMCBI 2008»
15 years 7 months ago
Is plant mitochondrial RNA editing a source of phylogenetic incongruence? An answer from in silico and in vivo data sets
Background: In plant mitochondria, the post-transcriptional RNA editing process converts C to U at a number of specific sites of the mRNA sequence and usually restores phylogeneti...
Ernesto Picardi, Carla Quagliariello
BMCBI
2006
115views more  BMCBI 2006»
15 years 7 months ago
The accuracy of several multiple sequence alignment programs for proteins
Background: There have been many algorithms and software programs implemented for the inference of multiple sequence alignments of protein and DNA sequences. The "true" ...
Paulo A. S. Nuin, Zhouzhi Wang, Elisabeth R. M. Ti...
BMCBI
2006
113views more  BMCBI 2006»
15 years 7 months ago
GibbsST: a Gibbs sampling method for motif discovery with enhanced resistance to local optima
Background: Computational discovery of transcription factor binding sites (TFBS) is a challenging but important problem of bioinformatics. In this study, improvement of a Gibbs sa...
Kazuhito Shida
EOR
2006
72views more  EOR 2006»
15 years 6 months ago
Experimental tour-based travel demand models
CT In this paper some experimental sequential models for the simulation of trip-chains are presented; the models have been calibrated on the base of a survey made in a medium-sized...
Demetrio C. Festa, Daniela Condino, Gabriella Mazz...
ENVSOFT
2007
93views more  ENVSOFT 2007»
15 years 6 months ago
A distributed model of water balance in the Motueka catchment, New Zealand
A distributed water balance model is used to simulate the soil moisture regime of the Motueka catchment. The model is a major simplification of the Distributed HydrologyeVegetati...
Robbie M. Andrew, John R. Dymond