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GECCO
2008
Springer
129views Optimization» more  GECCO 2008»
15 years 7 months ago
Searching for liveness property violations in concurrent systems with ACO
Liveness properties in concurrent systems are, informally, those properties that stipulate that something good eventually happens during execution. In order to prove that a given ...
Enrique Alba, J. Francisco Chicano
BMCBI
2008
123views more  BMCBI 2008»
15 years 6 months ago
Shape based indexing for faster search of RNA family databases
Background: Most non-coding RNA families exert their function by means of a conserved, common secondary structure. The Rfam data base contains more than five hundred structurally ...
Stefan Janssen, Jens Reeder, Robert Giegerich
BMCBI
2008
103views more  BMCBI 2008»
15 years 6 months ago
The VirusBanker database uses a Java program to allow flexible searching through Bunyaviridae sequences
Background: Viruses of the Bunyaviridae have segmented negative-stranded RNA genomes and several of them cause significant disease. Many partial sequences have been obtained from ...
Mathieu Fourment, Mark J. Gibbs
ALMOB
2006
155views more  ALMOB 2006»
15 years 6 months ago
Refining motifs by improving information content scores using neighborhood profile search
The main goal of the motif finding problem is to detect novel, over-represented unknown signals in a set of sequences (e.g. transcription factor binding sites in a genome). The mo...
Chandan K. Reddy, Yao-Chung Weng, Hsiao-Dong Chian...
GEOINFORMATICA
2007
223views more  GEOINFORMATICA 2007»
15 years 6 months ago
Algorithms for Nearest Neighbor Search on Moving Object Trajectories
Nearest Neighbor (NN) search has been in the core of spatial and spatiotemporal database research during the last decade. The literature on NN query processing algorithms so far d...
Elias Frentzos, Kostas Gratsias, Nikos Pelekis, Ya...