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BMCBI
2008
138views more  BMCBI 2008»
15 years 6 months ago
CASCADE: a novel quasi all paths-based network analysis algorithm for clustering biological interactions
Background: Quantitative characterization of the topological characteristics of protein-protein interaction (PPI) networks can enable the elucidation of biological functional modu...
Woochang Hwang, Young-Rae Cho, Aidong Zhang, Mural...
BMCBI
2007
120views more  BMCBI 2007»
15 years 6 months ago
Recognition of interferon-inducible sites, promoters, and enhancers
Background: Computational analysis of gene regulatory regions is important for prediction of functions of many uncharacterized genes. With this in mind, search of the target genes...
Elena A. Ananko, Yury V. Kondrakhin, Tatyana I. Me...
BMCBI
2008
160views more  BMCBI 2008»
15 years 6 months ago
Cross-species and cross-platform gene expression studies with the Bioconductor-compliant R package 'annotationTools'
Background: The variety of DNA microarray formats and datasets presently available offers an unprecedented opportunity to perform insightful comparisons of heterogeneous data. Cro...
Alexandre Kuhn, Ruth Luthi-Carter, Mauro Delorenzi
BMCBI
2008
158views more  BMCBI 2008»
15 years 6 months ago
Metrics for GO based protein semantic similarity: a systematic evaluation
Background: Several semantic similarity measures have been applied to gene products annotated with Gene Ontology terms, providing a basis for their functional comparison. However,...
Catia Pesquita, Daniel Faria, Hugo P. Bastos, Ant&...
JMIV
2006
176views more  JMIV 2006»
15 years 6 months ago
Segmentation of Vectorial Image Features Using Shape Gradients and Information Measures
In this paper, we propose to focus on the segmentation of vectorial features (e.g. vector fields or color intensity) using region-based active contours. We search for a domain that...
Ariane Herbulot, Stéphanie Jehan-Besson, St...
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