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ASAP
2008
IEEE
186views Hardware» more  ASAP 2008»
16 years 29 days ago
Accelerating Nussinov RNA secondary structure prediction with systolic arrays on FPGAs
RNA structure prediction, or folding, is a computeintensive task that lies at the core of several search applications in bioinformatics. We begin to address the need for high-thro...
Arpith C. Jacob, Jeremy Buhler, Roger D. Chamberla...
CHI
2008
ACM
16 years 6 months ago
Co-located group interaction design
This design theatre experience explores the use of choreographic improvisation exercises to reflect on the structures of interaction in a mobile, co-located group. The design tech...
Cecily Morrison, Alan F. Blackwell
GCC
2006
Springer
15 years 10 months ago
UGE4B: An Universal Grid Environment for Bioinformatics Research
Recent years, grid technology has been used widely in the fields of scientific research. In this paper, we present an universal grid environment for Bioinformatics Research (UGE4B...
Gang Chen, Yongwei Wu, Weimin Zheng
ERSHOV
2006
Springer
15 years 10 months ago
Streaming Networks for Coordinating Data-Parallel Programs
A new coordination language for distributed data-parallel programs is presented, call SNet. The intention of SNet is to introduce advanced structuring techniques into a coordinatio...
Clemens Grelck, Sven-Bodo Scholz, Alexander V. Sha...
NIPS
2004
15 years 7 months ago
Hierarchical Eigensolver for Transition Matrices in Spectral Methods
We show how to build hierarchical, reduced-rank representation for large stochastic matrices and use this representation to design an efficient algorithm for computing the largest...
Chakra Chennubhotla, Allan D. Jepson