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BMCBI
2008
117views more  BMCBI 2008»
15 years 6 months ago
RNACompress: Grammar-based compression and informational complexity measurement of RNA secondary structure
Background: With the rapid emergence of RNA databases and newly identified non-coding RNAs, an efficient compression algorithm for RNA sequence and structural information is neede...
Qi Liu, Yu Yang, Chun Chen, Jiajun Bu, Yin Zhang, ...
CSB
2004
IEEE
177views Bioinformatics» more  CSB 2004»
15 years 10 months ago
High-Throughput 3D Structural Homology Detection via NMR Resonance Assignment
One goal of the structural genomics initiative is the identification of new protein folds. Sequence-based structural homology prediction methods are an important means for priorit...
Christopher James Langmead, Bruce Randall Donald
CSB
2003
IEEE
176views Bioinformatics» more  CSB 2003»
15 years 12 months ago
3D Structural Homology Detection via Unassigned Residual Dipolar Couplings
Recognition of a protein’s fold provides valuable information about its function. While many sequence-based homology prediction methods exist, an important challenge remains: tw...
Christopher James Langmead, Bruce Randall Donald
AFRIGRAPH
2010
ACM
15 years 10 months ago
Visualization of solution sets from automated docking of molecular structures
Aligning structures, often referred to as docking or registration, is frequently required in fields such as computer science, robotics and structural biology. The task of alignin...
Johannes Jansen van Vuuren, Michelle Kuttel, James...
APWEB
2004
Springer
15 years 12 months ago
Improving XML Query Performance Using Social Classes
In a state-of-the-art XML database, an XML query is evaluated as a sequence of structural joins in which positions of data nodes are used to perform each individual structural joi...
Weining Zhang, Douglas Pollok