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» Detecting Motifs from Sequences
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ISBI
2002
IEEE
16 years 6 months ago
Cardiac ultrasound motion detection by elastic registration exploiting temporal coherence
We propose a new global registration method for estimating the cardiac displacement field in 2D sequences of ultrasound images of the heart. The basic idea is to select a referenc...
Andrés Santos, Jan Kybic, Manuel Desco, Mar...
BMCBI
2007
99views more  BMCBI 2007»
15 years 6 months ago
Flexible mapping of homology onto structure with Homolmapper
Background: Over the past decade, a number of tools have emerged for the examination of homology relationships among protein sequences in a structural context. Most recent softwar...
Nathan C. Rockwell, J. Clark Lagarias
FSTTCS
2003
Springer
15 years 11 months ago
Comparing Sequences with Segment Rearrangements
Computational genomics involves comparing sequences based on “similarity” for detecting evolutionary and functional relationships. Until very recently, available portions of th...
Funda Ergün, S. Muthukrishnan, Süleyman ...
BMCBI
2006
85views more  BMCBI 2006»
15 years 6 months ago
Identification of physicochemical selective pressure on protein encoding nucleotide sequences
Background: Statistical methods for identifying positively selected sites in protein coding regions are one of the most commonly used tools in evolutionary bioinformatics. However...
Wendy S. W. Wong, Raazesh Sainudiin, Rasmus Nielse...
CIBCB
2005
IEEE
15 years 11 months ago
The Homology Kernel: A Biologically Motivated Sequence Embedding into Euclidean Space
— Part of the challenge of modeling protein sequences is their discrete nature. Many of the most powerful statistical and learning techniques are applicable to points in a Euclid...
Eleazar Eskin, Sagi Snir