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BMCBI
2008
134views more  BMCBI 2008»
15 years 6 months ago
Identification of transcription factor contexts in literature using machine learning approaches
Background: Availability of information about transcription factors (TFs) is crucial for genome biology, as TFs play a central role in the regulation of gene expression. While man...
Hui Yang, Goran Nenadic, John A. Keane
SEMWEB
2007
Springer
16 years 5 days ago
TaxoMap in the OAEI 2007 Alignment Contest
This paper presents our first participation in the OAEI 2007 campaign. It describes an approach to align taxonomies which relies on terminological and structural techniques applie...
Haïfa Zargayouna, Brigitte Safar, Chantal Rey...
BIODATAMINING
2008
117views more  BIODATAMINING 2008»
15 years 6 months ago
Search extension transforms Wiki into a relational system: A case for flavonoid metabolite database
Background: In computer science, database systems are based on the relational model founded by Edgar Codd in 1970. On the other hand, in the area of biology the word 'databas...
Masanori Arita, Kazuhiro Suwa
BMCBI
2008
79views more  BMCBI 2008»
15 years 6 months ago
In silico docking of urokinase plasminogen activator and integrins
Background: Urokinase, its receptor and the integrins are functionally associated and involved in regulation of cell signaling, migration, adhesion and proliferation. No structura...
Bernard Degryse, Juan Fernández-Recio, Vale...
BMCBI
2006
102views more  BMCBI 2006»
15 years 6 months ago
UVPAR: fast detection of functional shifts in duplicate genes
Background: The imprint of natural selection on gene sequences is often difficult to detect. A plethora of methods have been devised to detect genetic changes due to selective pro...
Vicente Arnau, Miguel Gallach, J. Ignasi Lucas, Ig...