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BMCBI
2008
125views more  BMCBI 2008»
15 years 6 months ago
SynteBase/SynteView: a tool to visualize gene order conservation in prokaryotic genomes
Background: It has been repeatedly observed that gene order is rapidly lost in prokaryotic genomes. However, persistent synteny blocks are found when comparing more or less distan...
Frédéric Lemoine, Bernard Labedan, O...
CSI
2007
89views more  CSI 2007»
15 years 6 months ago
Writing and executing ODP computational viewpoint specifications using Maude
The Reference Model of Open Distributed Processing (RM-ODP) is a joint standardization effort by ITU-T and ISO/IEC for the specification of large open distributed systems. RM-ODP ...
José Raúl Romero, Antonio Vallecillo...
JUCS
2000
102views more  JUCS 2000»
15 years 6 months ago
Towards Two-Level Formal Modeling of Computer-Based Systems
: Embedded Computer-based Systems are becoming highly complex and hard to implement because of the large number of concerns the designers have to address. These systems are tightly...
Gabor Karsai, Greg Nordstrom, Ákos Lé...
ICPPW
2009
IEEE
15 years 4 months ago
A Scalable Parallel Approach for Peptide Identification from Large-Scale Mass Spectrometry Data
Identifying peptides, which are short polymeric chains of amino acid residues in a protein sequence, is of fundamental importance in systems biology research. The most popular appr...
Gaurav Ramesh Kulkarni, Ananth Kalyanaraman, Willi...
ASPLOS
2011
ACM
14 years 10 months ago
NV-Heaps: making persistent objects fast and safe with next-generation, non-volatile memories
nt, user-defined objects present an attractive abstraction for working with non-volatile program state. However, the slow speed of persistent storage (i.e., disk) has restricted ...
Joel Coburn, Adrian M. Caulfield, Ameen Akel, Laur...