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BMCBI
2008
109views more  BMCBI 2008»
15 years 6 months ago
LTRharvest, an efficient and flexible software for de novo detection of LTR retrotransposons
Background: Transposable elements are abundant in eukaryotic genomes and it is believed that they have a significant impact on the evolution of gene and chromosome structure. Whil...
David Ellinghaus, Stefan Kurtz, Ute Willhoeft
BMCBI
2006
116views more  BMCBI 2006»
15 years 6 months ago
MICA: desktop software for comprehensive searching of DNA databases
Background: Molecular biologists work with DNA databases that often include entire genomes. A common requirement is to search a DNA database to find exact matches for a nondegener...
William A. Stokes, Benjamin S. Glick
TC
2011
15 years 23 days ago
Software-Based Cache Coherence with Hardware-Assisted Selective Self-Invalidations Using Bloom Filters
— Implementing shared memory consistency models on top of hardware caches gives rise to the well-known cache coherence problem. The standard solution involves implementing cohere...
Thomas J. Ashby, Pedro Diaz, Marcelo Cintra
BMCBI
2007
246views more  BMCBI 2007»
15 years 6 months ago
TomoJ: tomography software for three-dimensional reconstruction in transmission electron microscopy
Background: Transmission electron tomography is an increasingly common three-dimensional electron microscopy approach that can provide new insights into the structure of subcellul...
Cédric Messaoudi, Thomas Boudier, Carlos Os...
CODES
2000
IEEE
15 years 10 months ago
Extended design reuse trade-offs in hardware-software architecture mapping
In the design of embedded systems-on-chip, the success of a product generation depends on the exibility to accommodate future design changes. This requirement in uences the hardwa...
Frederik Vermeulen, Francky Catthoor, Diederik Ver...