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» Dependency-Based Relation Mining for Biomedical Literature
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BMCBI
2005
189views more  BMCBI 2005»
15 years 5 months ago
A sentence sliding window approach to extract protein annotations from biomedical articles
Background: Within the emerging field of text mining and statistical natural language processing (NLP) applied to biomedical articles, a broad variety of techniques have been deve...
Martin Krallinger, Maria Padron, Alfonso Valencia
CIT
2004
Springer
15 years 9 months ago
BioPubMiner: Machine Learning Component-Based Biomedical Information Analysis Platform
Abstract. In this paper we introduce BioPubMiner, a machine learning component-based platform for biomedical information analysis. BioPubMiner employs natural language processing t...
Jae-Hong Eom, Byoung-Tak Zhang
BMCBI
2005
143views more  BMCBI 2005»
15 years 5 months ago
Evaluation of BioCreAtIvE assessment of task 2
Background: Molecular Biology accumulated substantial amounts of data concerning functions of genes and proteins. Information relating to functional descriptions is generally extr...
Christian Blaschke, Eduardo Andrés Le&oacut...
BMCBI
2010
110views more  BMCBI 2010»
15 years 6 months ago
Concept-based query expansion for retrieving gene related publications from MEDLINE
Background: Advances in biotechnology and in high-throughput methods for gene analysis have contributed to an exponential increase in the number of scientific publications in thes...
Sérgio Matos, Joel Arrais, João Maia...
IWANN
2009
Springer
16 years 16 days ago
Identifying Gene Ontology Areas for Automated Enrichment
Biomedical ontologies provide a commonly accepted scheme for the characterization of biological concepts that enable knowledge sharing and integration. Updating and maintaining an ...
Catia Pesquita, Tiago Grego, Francisco M. Couto