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JGS
2002
91views more  JGS 2002»
15 years 7 months ago
Toward micro-scale spatial modeling of gentrification
A simple preliminary model of gentrification is presented. The model is based on an irregular cellular automaton architecture drawing on the concept of proximal space, which is wel...
David O'Sullivan
BIBE
2005
IEEE
121views Bioinformatics» more  BIBE 2005»
16 years 1 months ago
RNA Pseudoknot Prediction Using Term Rewriting
RNA plays a critical role in mediating every step of cellular information transfer from genes to functional proteins. Pseudoknots are widely occurring structural motifs found in a...
Xuezheng Fu, Hao Wang, William L. Harrison, Robert...
BMCBI
2004
151views more  BMCBI 2004»
15 years 7 months ago
Design, implementation and evaluation of a practical pseudoknot folding algorithm based on thermodynamics
Background: The general problem of RNA secondary structure prediction under the widely used thermodynamic model is known to be NP-complete when the structures considered include a...
Jens Reeder, Robert Giegerich
EDBT
2009
ACM
118views Database» more  EDBT 2009»
16 years 2 months ago
Flexible query answering on graph-modeled data
The largeness and the heterogeneity of most graph-modeled datasets in several database application areas make the query process a real challenge because of the lack of a complete ...
Federica Mandreoli, Riccardo Martoglia, Giorgio Vi...
BMCBI
2007
102views more  BMCBI 2007»
15 years 7 months ago
qPIPSA: Relating enzymatic kinetic parameters and interaction fields
Background: The simulation of metabolic networks in quantitative systems biology requires the assignment of enzymatic kinetic parameters. Experimentally determined values are ofte...
Razif R. Gabdoulline, Matthias Stein, Rebecca C. W...