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RECOMB
2004
Springer
16 years 7 months ago
Mining protein family specific residue packing patterns from protein structure graphs
Finding recurring residue packing patterns, or spatial motifs, that characterize protein structural families is an important problem in bioinformatics. To this end, we apply a nov...
Jun Huan, Wei Wang 0010, Deepak Bandyopadhyay, Jac...
EDBT
2009
ACM
222views Database» more  EDBT 2009»
16 years 2 months ago
Data clouds: summarizing keyword search results over structured data
Keyword searches are attractive because they facilitate users searching structured databases. On the other hand, tag clouds are popular for navigation and visualization purposes o...
Georgia Koutrika, Zahra Mohammadi Zadeh, Hector Ga...
BMCBI
2008
130views more  BMCBI 2008»
15 years 7 months ago
Structural descriptor database: a new tool for sequence-based functional site prediction
Background: The Structural Descriptor Database (SDDB) is a web-based tool that predicts the function of proteins and functional site positions based on the structural properties o...
Juliana S. Bernardes, Jorge H. Fernandez, Ana Tere...
CGF
2011
14 years 10 months ago
Global Structure Optimization of Quadrilateral Meshes
We introduce a fully automatic algorithm which optimizes the high-level structure of a given quadrilateral mesh to achieve a coarser quadrangular base complex. Such a topological ...
David Bommes, Timm Lempfer, Leif Kobbelt
ECLIPSE
2005
ACM
15 years 9 months ago
eAssignment: a case for EMF
Developing Eclipse plug-ins often involves the creation of data structures and corresponding data processing code. In developing eAssignment, an Eclipse-bases application to suppo...
Marcel Bruch, Christoph Bockisch, Thorsten Sch&aum...