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BMCBI
2010
189views more  BMCBI 2010»
15 years 7 months ago
Efficient parallel and out of core algorithms for constructing large bi-directed de Bruijn graphs
Background: Assembling genomic sequences from a set of overlapping reads is one of the most fundamental problems in computational biology. Algorithms addressing the assembly probl...
Vamsi Kundeti, Sanguthevar Rajasekaran, Hieu Dinh,...
CORR
2010
Springer
275views Education» more  CORR 2010»
15 years 7 months ago
Dictionary Optimization for Block-Sparse Representations
Recent work has demonstrated that using a carefully designed dictionary instead of a predefined one, can improve the sparsity in jointly representing a class of signals. This has m...
Kevin Rosenblum, Lihi Zelnik-Manor, Yonina C. Elda...
WWW
2005
ACM
16 years 7 months ago
Web data extraction based on partial tree alignment
This paper studies the problem of extracting data from a Web page that contains several structured data records. The objective is to segment these data records, extract data items...
Yanhong Zhai, Bing Liu
CGO
2011
IEEE
14 years 11 months ago
Language and compiler support for auto-tuning variable-accuracy algorithms
—Approximating ideal program outputs is a common technique for solving computationally difficult problems, for adhering to processing or timing constraints, and for performance ...
Jason Ansel, Yee Lok Wong, Cy P. Chan, Marek Olsze...
EJC
2003
15 years 8 months ago
A Theory of Signs for Database Semantics
The goal of this paper is to build a bridge from a certain intuitive conception of natural language communication, called the SLIM theory of language, to a technical approach, cal...
Roland Hausser