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BICOB
2010
Springer
15 years 11 months ago
Folding-aware and Structure-conscious 3D Substructures in Folding Data: Identification and Applications
Molecular dynamics simulations have been employed by biologists to study the protein folding problem. Such simulations have resulted in a large number of protein folding trajector...
Hui Yang, Saurabh Gupte, Runtang Wang, Rahul Parte
205
Voted
KDD
2007
ACM
198views Data Mining» more  KDD 2007»
16 years 7 months ago
Applying Link-Based Classification to Label Blogs
In analyzing data from social and communication networks, we encounter the problem of classifying objects where there is an explicit link structure amongst the objects. We study t...
Smriti Bhagat, Graham Cormode, Irina Rozenbaum
198
Voted
ICS
2010
Tsinghua U.
15 years 11 months ago
Handling task dependencies under strided and aliased references
The emergence of multicore processors has increased the need for simple parallel programming models usable by nonexperts. The ability to specify subparts of a bigger data structur...
Josep M. Pérez, Rosa M. Badia, Jesús...
185
Voted
BMCBI
2006
114views more  BMCBI 2006»
15 years 7 months ago
A high level interface to SCOP and ASTRAL implemented in Python
Background: Benchmarking algorithms in structural bioinformatics often involves the construction of datasets of proteins with given sequence and structural properties. The SCOP da...
James A. Casbon, Gavin E. Crooks, Mansoor A. S. Sa...
KDD
2004
ACM
115views Data Mining» more  KDD 2004»
16 years 7 months ago
A New Approach to Protein Structure Mining and Alignment
Hongyuan Li, Keith Marsolo, Srinivasan Parthasarat...