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BMCBI
2008
105views more  BMCBI 2008»
15 years 6 months ago
A gene pattern mining algorithm using interchangeable gene sets for prokaryotes
Background: Mining gene patterns that are common to multiple genomes is an important biological problem, which can lead us to novel biological insights. When family classification...
Meng Hu, Kwangmin Choi, Wei Su, Sun Kim, Jiong Yan...
TCBB
2010
144views more  TCBB 2010»
15 years 1 months ago
Querying Graphs in Protein-Protein Interactions Networks Using Feedback Vertex Set
Recent techniques increase rapidly the amount of our knowledge on interactions between proteins. The interpretation of these new information depends on our ability to retrieve kno...
Guillaume Blin, Florian Sikora, Stéphane Vi...
ICDE
1994
IEEE
103views Database» more  ICDE 1994»
15 years 10 months ago
A Multi-Set Extended Relational Algebra - A Formal Approach to a Practical Issue
The relational data model is based on sets of tuples, i.e. it does not allow duplicate tuples in a relation. Many database languages and systems do require multi-set place, the hi...
Paul W. P. J. Grefen, Rolf A. de By
BMCBI
2008
119views more  BMCBI 2008»
15 years 6 months ago
A new method for 2D gel spot alignment: application to the analysis of large sample sets in clinical proteomics
Background: In current comparative proteomics studies, the large number of images generated by 2D gels is currently compared using spot matching algorithms. Unfortunately, differe...
Sabine Pérès, Laurence Molina, Nicol...
VLDB
2007
ACM
108views Database» more  VLDB 2007»
16 years 6 months ago
Time Series Compressibility and Privacy
In this paper we study the trade-offs between time series compressibility and partial information hiding and their fundamental implications on how we should introduce uncertainty ...
Spiros Papadimitriou, Feifei Li, George Kollios, P...