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IPPS
2009
IEEE
16 years 1 months ago
Dynamic parallelization for RNA structure comparison
In this paper we describe the parallelization of a dynamic programming algorithm used to find common RNA secondary structures including pseudoknots and similar structures. The se...
Eric Snow, Eric Aubanel, Patricia Evans
SAC
2003
ACM
15 years 11 months ago
Real-Time Monitoring of Large Scientific Simulations
We present a distributed framework that enables real-time streaming and visualization of data generated by large remote simulations. We address issues arising from distributed cli...
Valerio Pascucci, Daniel E. Laney, Ray J. Frank, F...
ICPP
1998
IEEE
15 years 10 months ago
A memory-layout oriented run-time technique for locality optimization
Exploiting locality at run-time is a complementary approach to a compiler approach for those applications with dynamic memory access patterns. This paper proposes a memory-layout ...
Yong Yan, Xiaodong Zhang, Zhao Zhang
SDM
2004
SIAM
211views Data Mining» more  SDM 2004»
15 years 7 months ago
Using Support Vector Machines for Classifying Large Sets of Multi-Represented Objects
Databases are a key technology for molecular biology which is a very data intensive discipline. Since molecular biological databases are rather heterogeneous, unification and data...
Hans-Peter Kriegel, Peer Kröger, Alexey Pryak...
ADMA
2009
Springer
142views Data Mining» more  ADMA 2009»
16 years 1 months ago
Crawling Deep Web Using a New Set Covering Algorithm
Abstract. Crawling the deep web often requires the selection of an appropriate set of queries so that they can cover most of the documents in the data source with low cost. This ca...
Yan Wang, Jianguo Lu, Jessica Chen