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» DNA Tiles, Wang Tiles and Combinators
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DNA
2007
Springer
16 years 24 days ago
Staged Self-assembly: Nanomanufacture of Arbitrary Shapes with O (1) Glues
We introduce staged self-assembly of Wang tiles, where tiles can be added dynamically in sequence and where intermediate constructions can be stored for later mixing. This model a...
Erik D. Demaine, Martin L. Demaine, Sándor ...
ICS
2010
Tsinghua U.
15 years 10 months ago
Memory Consistency Conditions for Self-Assembly Programming
: Perhaps the two most significant theoretical questions about the programming of self-assembling agents are: (1) necessary and sufficient conditions to produce a unique terminal a...
Aaron Sterling
157
Voted
BMCBI
2008
103views more  BMCBI 2008»
15 years 6 months ago
Parameter estimation for robust HMM analysis of ChIP-chip data
Background: Tiling arrays are an important tool for the study of transcriptional activity, proteinDNA interactions and chromatin structure on a genome-wide scale at high resolutio...
Peter Humburg, David Bulger, Glenn Stone
BMCBI
2010
153views more  BMCBI 2010»
15 years 6 months ago
Starr: Simple Tiling ARRay analysis of Affymetrix ChIP-chip data
Background: Chromatin immunoprecipitation combined with DNA microarrays (ChIP-chip) is an assay used for investigating DNA-protein-binding or post-translational chromatin/histone ...
Benedikt Zacher, Pei Fen Kuan, Achim Tresch
BMCBI
2010
95views more  BMCBI 2010»
15 years 6 months ago
An effective approach for identification of in vivo protein-DNA binding sites from paired-end ChIP-Seq data
Background: ChIP-Seq, which combines chromatin immunoprecipitation (ChIP) with high-throughput massively parallel sequencing, is increasingly being used for identification of prot...
Congmao Wang, Jie Xu, Dasheng Zhang, Zoe A. Wilson...