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BMCBI
2010
100views more  BMCBI 2010»
15 years 6 months ago
Scaffold filling, contig fusion and comparative gene order inference
Background: There has been a trend in increasing the phylogenetic scope of genome sequencing without finishing the sequence of the genome. Increasing numbers of genomes are being ...
Adriana Muñoz, Chunfang Zheng, Qian Zhu, Vi...
BMCBI
2007
112views more  BMCBI 2007»
15 years 6 months ago
Inferring biological functions and associated transcriptional regulators using gene set expression coherence analysis
Background: Gene clustering has been widely used to group genes with similar expression pattern in microarray data analysis. Subsequent enrichment analysis using predefined gene s...
Tae-Min Kim, Yeun-Jun Chung, Mun-Gan Rhyu, Myeong ...
JMLR
2006
113views more  JMLR 2006»
15 years 6 months ago
On Inferring Application Protocol Behaviors in Encrypted Network Traffic
Several fundamental security mechanisms for restricting access to network resources rely on the ability of a reference monitor to inspect the contents of traffic as it traverses t...
Charles V. Wright, Fabian Monrose, Gerald M. Masso...
BMCBI
2005
137views more  BMCBI 2005»
15 years 6 months ago
A configuration space of homologous proteins conserving mutual information and allowing a phylogeny inference based on pair-wise
Background: Popular methods to reconstruct molecular phylogenies are based on multiple sequence alignments, in which addition or removal of data may change the resulting tree topo...
Olivier Bastien, Philippe Ortet, Sylvaine Roy, Eri...
HUC
2011
Springer
14 years 6 months ago
Enabling large-scale human activity inference on smartphones using community similarity networks (csn)
Sensor-enabled smartphones are opening a new frontier in the development of mobile sensing applications. The recognition of human activities and context from sensor-data using cla...
Nicholas D. Lane, Ye Xu, Hong Lu, Shaohan Hu, Tanz...