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BMCBI
2010
178views more  BMCBI 2010»
15 years 6 months ago
An improved method for scoring protein-protein interactions using semantic similarity within the Gene Ontology
Background: Semantic similarity measures are useful to assess the physiological relevance of protein-protein interactions (PPIs). They quantify similarity between proteins based o...
Shobhit Jain, Gary D. Bader
BMCBI
2008
119views more  BMCBI 2008»
15 years 6 months ago
Gene Ontology density estimation and discourse analysis for automatic GeneRiF extraction
Background: This paper describes and evaluates a sentence selection engine that extracts a GeneRiF (Gene Reference into Functions) as defined in ENTREZ-Gene based on a MEDLINE rec...
Julien Gobeill, Imad Tbahriti, Frédé...
OTM
2009
Springer
16 years 1 months ago
Ontology-Driven Provenance Management in eScience: An Application in Parasite Research
Provenance, from the French word “provenir”, describes the lineage or history of a data entity. Provenance is critical information in scientific applications to verify experime...
Satya Sanket Sahoo, D. Brent Weatherly, Raghava Mu...
BIBM
2008
IEEE
217views Bioinformatics» more  BIBM 2008»
16 years 1 months ago
Combining Hierarchical Inference in Ontologies with Heterogeneous Data Sources Improves Gene Function Prediction
The study of gene function is critical in various genomic and proteomic fields. Due to the availability of tremendous amounts of different types of protein data, integrating thes...
Xiaoyu Jiang, Naoki Nariai, Martin Steffen, Simon ...
HICSS
2002
IEEE
123views Biometrics» more  HICSS 2002»
15 years 11 months ago
An Ontology-Based HTML to XML Conversion Using Intelligent Agents
How to organize and classify large amounts of heterogeneous information accessible over the Internet is a major problem faced by industry, government, and military organizations. ...
Thomas E. Potok, Mark T. Elmore, Joel W. Reed, Nag...