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CSB
2005
IEEE
125views Bioinformatics» more  CSB 2005»
16 years 1 days ago
On Optimizing Distance-Based Similarity Search for Biological Databases
Similarity search leveraging distance-based index structures is increasingly being used for both multimedia and biological database applications. We consider distance-based indexi...
Rui Mao, Weijia Xu, Smriti R. Ramakrishnan, Glen N...
DATESO
2007
157views Database» more  DATESO 2007»
15 years 7 months ago
Index-Based Approach to Similarity Search in Protein and Nucleotide Databases
When searching databases of nucleotide or protein sequences, finding a local alignment of two sequences is one of the main tasks. Since the sizes of available databases grow const...
David Hoksza, Tomás Skopal
EVOW
2007
Springer
16 years 17 days ago
A Probabilistic Beam Search Approach to the Shortest Common Supersequence Problem
The Shortest Common Supersequence Problem (SCSP) is a well-known hard combinatorial optimization problem that formalizes many real world problems. This paper presents a novel rando...
Christian Blum, Carlos Cotta, Antonio J. Fern&aacu...
AIPS
2006
15 years 7 months ago
Exploiting the Power of Local Search in a Branch and Bound Algorithm for Job Shop Scheduling
This paper presents three techniques for using an iterated local search algorithm to improve the performance of a state-of-the-art branch and bound algorithm for job shop scheduli...
Matthew J. Streeter, Stephen F. Smith
CONSTRAINTS
2010
101views more  CONSTRAINTS 2010»
15 years 6 months ago
Evaluating the impact of AND/OR search on 0-1 integer linear programming
AND/OR search spaces accommodate advanced algorithmic schemes for graphical models which can exploit the structure of the model. We extend and evaluate the depth-first and best-fi...
Radu Marinescu 0002, Rina Dechter