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» Conservativity in Structured Ontologies
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TREC
2003
15 years 7 months ago
Knowledge-Based Access to the Bio-Medical Literature, Ontologically-Grounded Experiments for the TREC 2003 Genomics Track
The Tarragon Consulting team participated in the primary task of the TREC 2003 Genomics Track. We used a combination of knowledge-engineering and corpus analysis to construct sema...
Richard Tong, John Quackenbush, Mark Snuffin
BMCBI
2004
142views more  BMCBI 2004»
15 years 6 months ago
GOTree Machine (GOTM): a web-based platform for interpreting sets of interesting genes using Gene Ontology hierarchies
Background: Microarray and other high-throughput technologies are producing large sets of interesting genes that are difficult to analyze directly. Bioinformatics tools are needed...
Bing Zhang, Denise Schmoyer, Stefan Kirov, Jay Sno...
BIBE
2006
IEEE
138views Bioinformatics» more  BIBE 2006»
16 years 16 days ago
Assigning Schema Labels Using Ontology And Hueristics
Bioinformatics data is growing at a phenomenal rate. Besides the exponential growth of individual databases, the number of data depositories is increasing too. Because of the comp...
Xuan Zhang, Ruoming Jin, Gagan Agrawal
KCAP
2005
ACM
16 years 19 hour ago
Semantic Association of Taxonomy-based Standards Using Ontology
The vision of semantic interoperability, the fluid sharing of digitalized knowledge, has led much research on ontology/schema mapping/aligning. Although this line of research is f...
Hung-Ju Chu, Randy Y. C. Chow, Su-Shing Chen, Raja...
CIKM
2005
Springer
16 years 2 hour ago
Semantic similarity over the gene ontology: family correlation and selecting disjunctive ancestors
Many bioinformatics applications would benefit from comparing proteins based on their biological role rather than their sequence. In most biological databases, proteins are alrea...
Francisco M. Couto, Mário J. Silva, Pedro C...