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» Conservativity in Structured Ontologies
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BMCBI
2005
112views more  BMCBI 2005»
15 years 6 months ago
Integration of the Gene Ontology into an object-oriented architecture
Background: To standardize gene product descriptions, a formal vocabulary defined as the Gene Ontology (GO) has been developed. GO terms have been categorized into biological proc...
Daniel Shegogue, W. Jim Zheng
GBRPR
2007
Springer
15 years 10 months ago
An Efficient Ontology-Based Expert Peering System
Abstract. This paper proposes an expert peering system for information exchange. Our objective is to develop a real-time search engine for an online community where users can ask e...
Tansu Alpcan, Christian Bauckhage, Sachin Agarwal
BMCBI
2007
131views more  BMCBI 2007»
15 years 6 months ago
FUNC: a package for detecting significant associations between gene sets and ontological annotations
Background: Genome-wide expression, sequence and association studies typically yield large sets of gene candidates, which must then be further analysed and interpreted. Informatio...
Kay Prüfer, Bjoern Muetzel, Hong Hai Do, Gunt...
NAR
2008
175views more  NAR 2008»
15 years 6 months ago
Onto-CC: a web server for identifying Gene Ontology conceptual clusters
The Gene Ontology (GO) vocabulary has been extensively explored to analyze the functions of coexpressed genes. However, despite its extended use in Biology and Medical Sciences, t...
Rocío Romero-Záliz, Coral del Val, J...
BMCBI
2010
139views more  BMCBI 2010»
15 years 6 months ago
PoGO: Prediction of Gene Ontology terms for fungal proteins
Background: Automated protein function prediction methods are the only practical approach for assigning functions to genes obtained from model organisms. Many of the previously re...
Jaehee Jung, Gangman Yi, Serenella A. Sukno, Micha...