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» Conservativity in Structured Ontologies
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BMCBI
2005
75views more  BMCBI 2005»
15 years 6 months ago
Prediction of a common structural scaffold for proteasome lid, COP9-signalosome and eIF3 complexes
Background: The 'lid' subcomplex of the 26S proteasome and the COP9 signalosome (CSN complex) share a common architecture consisting of six subunits harbouring a so-call...
Hartmut Scheel, Kay Hofmann
BMCBI
2004
174views more  BMCBI 2004»
15 years 6 months ago
Implications for domain fusion protein-protein interactions based on structural information
Background: Several in silico methods exist that were developed to predict protein interactions from the copious amount of genomic and proteomic data. One of these methods is Doma...
Jer-Ming Chia, Prasanna R. Kolatkar
ATAL
2009
Springer
16 years 28 days ago
Distributed constraint optimization with structured resource constraints
Distributed constraint optimization (DCOP) provides a framework for coordinated decision making by a team of agents. Often, during the decision making, capacity constraints on age...
Akshat Kumar, Boi Faltings, Adrian Petcu
BIBE
2007
IEEE
114views Bioinformatics» more  BIBE 2007»
16 years 21 days ago
A Hierarchical Grow-and-Match Algorithm for Backbone Resonance Assignments Given 3D Structure
Abstract—This paper develops an algorithm for NMR backbone resonance assignment given a 3D structure and a set of relatively sparse 15 N-edited NMR data, with the through-space 1...
Fei Xiong, Chris Bailey-Kellogg
BMCBI
2007
148views more  BMCBI 2007»
15 years 6 months ago
Blast sampling for structural and functional analyses
Background: The post-genomic era is characterised by a torrent of biological information flooding the public databases. As a direct consequence, similarity searches starting with ...
Anne Friedrich, Raymond Ripp, Nicolas Garnier, Emm...