Title of Dissertation: INTERACTIVE GRAPHICAL QUERYING OF TIME SERIES AND LINEAR SEQUENCE DATA SETS Harry Hochheiser, Doctor of Philosophy, 2003 Dissertation directed by: Professor...
We have combined four different types of functional genomic data to create high coverage protein interaction networks for 11 microbes. Our integration algorithm naturally handles s...
Balaji S. Srinivasan, Antal F. Novak, Jason Flanni...
Abstract. Gene rearrangements have been used successfully in phylogenetic reconstruction and comparative genomics, but usually under the assumption that all genomes have the same g...
Krister M. Swenson, Nicholas D. Pattengale, Bernar...
Large-scale comparison of genomic DNA is of fundamental importance in annotating functional elements of genomes. To perform large comparisons efficiently, BLAST (Methods: Companio...
We study the entropy rate of a hidden Markov process (HMP) defined by observing the output of a binary symmetric channel whose input is a first-order binary Markov process. Despit...
Philippe Jacquet, Gadiel Seroussi, Wojciech Szpank...