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CHI
2002
ACM
16 years 7 months ago
Interactive querying of time series data
Title of Dissertation: INTERACTIVE GRAPHICAL QUERYING OF TIME SERIES AND LINEAR SEQUENCE DATA SETS Harry Hochheiser, Doctor of Philosophy, 2003 Dissertation directed by: Professor...
Harry Hochheiser
RECOMB
2006
Springer
16 years 7 months ago
Integrated Protein Interaction Networks for 11 Microbes
We have combined four different types of functional genomic data to create high coverage protein interaction networks for 11 microbes. Our integration algorithm naturally handles s...
Balaji S. Srinivasan, Antal F. Novak, Jason Flanni...
RECOMB
2005
Springer
16 years 7 months ago
A Framework for Orthology Assignment from Gene Rearrangement Data
Abstract. Gene rearrangements have been used successfully in phylogenetic reconstruction and comparative genomics, but usually under the assumption that all genomes have the same g...
Krister M. Swenson, Nicholas D. Pattengale, Bernar...
RECOMB
2003
Springer
16 years 7 months ago
Designing seeds for similarity search in genomic DNA
Large-scale comparison of genomic DNA is of fundamental importance in annotating functional elements of genomes. To perform large comparisons efficiently, BLAST (Methods: Companio...
Jeremy Buhler, Uri Keich, Yanni Sun
DCC
2004
IEEE
16 years 6 months ago
On the Entropy of a Hidden Markov Process
We study the entropy rate of a hidden Markov process (HMP) defined by observing the output of a binary symmetric channel whose input is a first-order binary Markov process. Despit...
Philippe Jacquet, Gadiel Seroussi, Wojciech Szpank...