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BIOINFORMATICS
2005
140views more  BIOINFORMATICS 2005»
15 years 6 months ago
Profile-based direct kernels for remote homology detection and fold recognition
Motivation: Remote homology detection between protein sequences is a central problem in computational biology. Supervised learning algorithms based on support vector machines are ...
Huzefa Rangwala, George Karypis
JCB
2002
111views more  JCB 2002»
15 years 6 months ago
A General Edit Distance between RNA Structures
Arc-annotated sequences are useful in representing the structural information of RNA sequences. In general, RNA secondary and tertiary structures can be represented as a set of ne...
Tao Jiang, Guohui Lin, Bin Ma, Kaizhong Zhang
SAC
2008
ACM
15 years 6 months ago
XBird/D: distributed and parallel XQuery processing using remote proxy
In this paper, we focus on an aspect of distributed XQuery processing that involves data exchanges between processor elements. We first address problems of distributed XML query p...
Makoto Yui, Jun Miyazaki, Shunsuke Uemura, Hirokaz...
BIOINFORMATICS
2012
13 years 9 months ago
SSuMMo: rapid analysis, comparison and visualization of microbial communities
Motivation: Next-generation sequencing methods are generating increasingly massive datasets, yet still do not fully capture genetic diversity in the richest environments. To under...
Alex L. B. Leach, James P. J. Chong, Kelly R. Rede...
ICPR
2006
IEEE
16 years 8 months ago
Anomaly Detection for Video Surveillance Applications
We investigate the problem of anomaly detection for video surveillance applications. In our approach, we use a compression-based similarity measure to determine similarity between...
Carmen E. Au, James J. Clark, Sandra Skaff