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WABI
2007
Springer
133views Bioinformatics» more  WABI 2007»
16 years 26 days ago
RNA Folding Including Pseudoknots: A New Parameterized Algorithm and Improved Upper Bound
Predicting the secondary structure of an RNA sequence is an important problem in structural bioinformatics. The general RNA folding problem, where the sequence to be folded may con...
Chunmei Liu, Yinglei Song, Louis W. Shapiro
ICSE
2000
IEEE-ACM
15 years 10 months ago
Generating statechart designs from scenarios
This paper presents an algorithm for automatically generating UML statecharts from a collection of UML sequence diagrams. Computer support for this transition between requirements...
Jon Whittle, Johann Schumann
DATESO
2007
157views Database» more  DATESO 2007»
15 years 8 months ago
Index-Based Approach to Similarity Search in Protein and Nucleotide Databases
When searching databases of nucleotide or protein sequences, finding a local alignment of two sequences is one of the main tasks. Since the sizes of available databases grow const...
David Hoksza, Tomás Skopal
BMCBI
2008
116views more  BMCBI 2008»
15 years 6 months ago
GBParsy: A GenBank flatfile parser library with high speed
Background: GenBank flatfile (GBF) format is one of the most popular sequence file formats because of its detailed sequence features and ease of readability. To use the data in th...
Tae-Ho Lee, Yeon-Ki Kim, Baek Hie Nahm
CVPR
2000
IEEE
16 years 8 months ago
Representation and Recognition of Complex Human Motion
The quest for a vision system capable of representing and recognizing arbitrary motions benefits from a low dimensional, non-specific representation of flow fields, to be used in ...
Jesse Hoey, James J. Little