In this paper we present a parallel implementation of T–Coffee — a widely used multiple sequence alignment package. Our software supports a majority of options provided by the...
Jaroslaw Zola, Xiao Yang, Adrian Rospondek, Sriniv...
For aligning DNA sequences that differ only by sequencing errors, or by equivalent errors from other sources, a greedy algorithm can be much faster than traditional dynamic progra...
Zheng Zhang 0004, Scott Schwartz, Lukas Wagner, We...
The paper studies a domain theoretical notion of primitive recursion over partial sequences in the context of Scott domains. Based on a non-monotone coding of partial sequences, t...
The car sequencing problem consists in sequencing a given set of cars to be produced in a single day. We address one of the variants of this problem, in which the objective of mini...
Celso C. Ribeiro, Daniel Aloise, Thiago F. Noronha...
A sequence fn(q) is q-holonomic if it satisfies a nontrivial linear recurrence with coefficients polynomials in q and qn . Our main theorem states that q-holonomicity is preserve...