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PPSN
2004
Springer
15 years 11 months ago
An Evolutionary Algorithm for the Maximum Weight Trace Formulation of the Multiple Sequence Alignment Problem
Abstract. The multiple sequence alignment problem (MSA) can be reformulated as the problem of finding a maximum weight trace in an alignment graph, which is derived from all pairw...
Gabriele Koller, Günther R. Raidl
IPPS
2002
IEEE
15 years 11 months ago
On Cost-Optimal Merge of Two Intransitive Sorted Sequences
The problem of merging two intransitive sorted sequences (that is, to generate a sorted total order without the transitive property) is considered. A cost-optimal parallel merging...
Jie Wu, Stephan Olariu
RECOMB
2002
Springer
16 years 6 months ago
Combining pairwise sequence similarity and support vector machines for remote protein homology detection
One key element in understanding the molecular machinery of the cell is to understand the meaning, or function, of each protein encoded in the genome. A very successful means of i...
Li Liao, William Stafford Noble
ECCV
2002
Springer
16 years 8 months ago
Diffuse-Specular Separation and Depth Recovery from Image Sequences
Specular reflections present difficulties for many areas of computer vision such as stereo and segmentation. To separate specular and diffuse reflection components, previous approa...
Stephen Lin, Yuanzhen Li, Sing Bing Kang, Xin Tong...
IPPS
2010
IEEE
15 years 4 months ago
Exploring parallelism in short sequence mapping using Burrows-Wheeler Transform
Next-generation high throughput sequencing instruments are capable of generating hundreds of millions of reads in a single run. Mapping those reads to a reference genome is an ext...
Doruk Bozdag, Ayat Hatem, Ümit V. Çata...